Class CgNucleotidePicker

Hierarchy

CgMonomerPicker
- CgNucleotidePicker

Index

Constructors

constructor

Properties

Accessors

data
type

Methods

Constructors

constructor

new CgNucleotidePicker(array: number[] | TypedArray, polymers: CgPolymer[], polCounts: number[]): CgNucleotidePicker

Inherited from CgPicker.constructor

Overrides Picker.constructor
- Defined in backend/src/catana/picker/cg-picker.ts:12
Parameters
- array: number[] | TypedArray
  
  Array with indices corresponding to individual picking IDs
- polymers: CgPolymer[]
  
  list of polymers referencing individual picked elements (in order)
- polCounts: number[]
  
  portion of "array" covered by each polymer
Returns CgNucleotidePicker

Properties

Protected _polCounts

_polCounts: number[]

Protected _polymers

_polymers: CgPolymer[]

array

array: number[] | TypedArray | undefined

Accessors

data

get data(): CgPolymer[]

Inherited from CgPicker.data

Overrides Picker.data
- Defined in backend/src/catana/picker/cg-picker.ts:31
override

Returns CgPolymer[]

type

get type(): string

Overrides CgPicker.type
- Defined in backend/src/catana/picker/cg-nucleotide-picker.ts:7
override

Returns string

Methods

_applyTransformations

_applyTransformations(vector: Vector3, instance: any, component: Component): Vector3

Inherited from LatticeCellPicker._applyTransformations
- Defined in backend/src/utils/picker.ts:71
Parameters
- vector: Vector3
- instance: any
- component: Component
Returns Vector3

_getPosition

_getPosition(pid: number): Vector3

Inherited from CgMonomerPicker._getPosition

Overrides CgPicker._getPosition
- Defined in backend/src/catana/picker/cg-monomer-picker.ts:10
override

Parameters
- pid: number
Returns Vector3

getIndex

getIndex(pid: number): number

Inherited from LatticeCellPicker.getIndex
- Defined in backend/src/utils/picker.ts:57
Get the index for the given picking id

Parameters
- pid: number
  
  the picking id
Returns number

the index

getObject

getObject(pid: number): CgNucleotideProxy

Overrides CgMonomerPicker.getObject
- Defined in backend/src/catana/picker/cg-nucleotide-picker.ts:12
override

Parameters
- pid: number
Returns CgNucleotideProxy

Protected getParent

getParent(pid: number): CgPolymer

Inherited from CgPicker.getParent
- Defined in backend/src/catana/picker/cg-picker.ts:47
Returns parent polymer for given picking ID.

Parameters
- pid: number
  
  picking id
Returns CgPolymer

coarse-grained polymer containing the object with this ID

getPosition

getPosition(pid: number, instance: any, component: Component): Vector3

Inherited from LatticeCellPicker.getPosition
- Defined in backend/src/utils/picker.ts:98
Get position for the given picking id

Parameters
- pid: number
  
  the picking id
- instance: any
  
  the instance that should be applied
- component: Component
  
  the component of the picked object
Returns Vector3

the position

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